
Bipedal robots at Amazon’s Robotics Analysis and Improvement Hub in Sumner, Washington.Credit score: Jason Redmond/AFP by way of Getty
Since 20 January, US science has been upended by extreme cutbacks from the administration of US President Donald Trump. A series of dramatic reductions in grants and budgets — together with the US Nationwide Institutes of Well being (NIH) slashing reimbursements of oblique analysis prices to universities from round 50% to fifteen% — and deep cuts to staffing at research agencies have despatched shock waves all through the educational group.
The US is the world’s science superpower — but for how long?
These cutbacks put the complete US analysis enterprise in danger. For greater than eight many years, the US has stood unrivalled because the world’s chief in scientific discovery and technological innovation. Collectively, US universities spin off greater than 1,100 science-based start-up firms every year, resulting in numerous merchandise which have saved and improved tens of millions of lives, together with coronary heart and most cancers medication, and the mRNA-based vaccines that helped to carry the world out of the COVID-19 pandemic.
These breakthroughs had been made potential largely by a strong partnership between the US authorities and universities. This method emerged as an expedient wartime design to fund weapons analysis and growth (R&D) in universities. It has fuelled US innovation, nationwide safety and financial development.
However, at present, this engine is being sabotaged within the Trump administration’s try to purge analysis programmes in areas it doesn’t help, comparable to climate change and diversity, equity and inclusion, and to rein in campus protests. However the broader cuts are additionally dismantling the very infrastructure that made the US a scientific superpower. At finest, US analysis is in danger from pleasant hearth; at worst, it’s political short-sightedness.
Researchers mustn’t be complacent. They have to talk the distinction between eliminating ideologically objectionable programmes and undermining the complete analysis ecosystem. Right here’s why the US analysis system is uniquely helpful, and what stands to be misplaced.
Distinctive innovation mannequin
The spine of US innovation is a detailed partnership between authorities, universities and business. It’s a well-calibrated ecosystem: federally funded analysis at universities drives scientific development, which in flip spins off expertise, patents and corporations. This method emerged within the wake of the Second World Warfare, rooted within the imaginative and prescient of US presidential science adviser Vannevar Bush and a far-sighted Congress, which acknowledged that US financial and army power hinge on funding in science (see ‘Two methods’).
It needn’t have been this manner. Earlier than the Second World Warfare, the UK led the world in lots of scientific domains, however its concentrate on centralized authorities laboratories reasonably than college partnerships stifled post-war commercialization. In contrast, the US channelled wartime analysis funds into universities, enabling breakthroughs that had been scaled up by personal business to drive the nation’s post-war financial increase. This partnership turned the muse of Silicon Valley and the aerospace, nuclear and biotechnology industries.
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The US authorities stays the biggest supply of educational R&D funding globally — with a price range of US$201.9 billion for federal R&D within the monetary 12 months 2025. Out of this pot, greater than two dozen analysis companies direct grants to US universities, totalling $59.7 billion in 2023, with the NIH and the US Nationwide Science Basis (NSF) receiving essentially the most.
The companies do that for a motive: they need professors at universities to do analysis for them. In alternate, the companies get primary analysis from universities that strikes science ahead, or utilized analysis that creates prototypes of potential merchandise. By partnering with universities, the companies get extra worth for cash and faster innovation than in the event that they did all of the analysis themselves.
It’s because universities can leverage their investments from the federal government with different funds that they attract. For instance, in 2023, US universities obtained $27.7 billion from charitable donations, $6.2 billion in industrial collaborations, $6.7 billion from non-profit organizations, $5.4 billion from state and native authorities and $3.1 billion from different sources — boosting the $59.7 billion as much as $108.8 billion (see ‘US analysis ecosystem’). This exterior cash goes largely to creating analysis labs and buildings that, as any campus customer has seen, are sometimes named after their donors.

Supply: US Natl Middle for Science and Engineering Statistics; US Congress; US Natl Enterprise Capital Assoc; AUTM; Small Enterprise Administration
Thus, federal funding for science analysis in the US is decentralized. It helps largely curiosity-driven primary science, but in addition prizes innovation and business applicability. Tutorial freedom is valued and competitors for grants is managed by way of peer overview. Different nations, together with China and people in Europe, are likely to have more-centralized and bureaucratic approaches.
However what makes the US ecosystem so highly effective is what then occurs to the college analysis: it’s the engine for creating start-ups and jobs. In 2023, US universities licensed 3,000 patents, 3,200 copyrights and 1,600 different licences to expertise start-ups and present firms. Such corporations spin off greater than 1,100 science-based start-ups every year, which result in numerous merchandise.
Because the 1980 Bayh–Dole Act, US universities have been capable of retain possession of innovations that had been developed utilizing federally funded analysis (see go.nature.com/4cesprf). Earlier than this regulation, any patents ensuing from government-funded analysis had been owned by the federal government, in order that they usually went unused.
Closing the loop, these expertise start-ups additionally get a yearly $4-billion injection in seed-funding grants from the identical authorities analysis companies. Enterprise capital provides a whopping $171 billion to scale these investments.
All of it provides as much as a virtuous circle of discovery and innovation.
Amenities prices
An important however under-appreciated element of this US analysis ecosystem is the indirect-cost reimbursement system, which permits universities to take care of the amenities and administrative help obligatory for cutting-edge analysis. Critics usually misunderstand the operate of those funds, assuming that universities can spend this cash on different areas, comparable to variety, fairness and inclusion programmes. In actuality, they fund important infrastructure: laboratory house, compliance with security rules, information storage and administrative help that permits principal investigators to concentrate on science reasonably than paperwork. With out this help, universities can not maintain world-class analysis.
Reimbursing universities for oblique prices started in the course of the Second World Warfare, and broke floor, simply because the weapons growth did. Not like in a typical fixed-price contract, the federal government didn’t set necessities for college researchers to satisfy or specs for them to design their analysis to. It requested them to do analysis and, if the analysis seemed prefer it may clear up a army downside, to construct a prototype they may take a look at. In return, the federal government paid the researchers for his or her direct and oblique analysis prices.

Vannevar Bush (proper) led the US Workplace of Scientific Analysis and Improvement in the course of the Second World Warfare.Credit score: Bettmann/Getty
At first, the federal government reimbursed universities for oblique prices at a flat fee of 25% of direct prices. Not like companies, universities had no revenue margin, so indirect-cost restoration was their solely solution to pay for and keep their analysis infrastructure. By the top of the struggle, some universities had agreed on a 50% fee. The speed is utilized to direct prices, so {that a} principal investigator will have the ability to spend two-thirds of a grant on direct analysis prices and the remainder will go to the college for oblique prices. (A typical false impression is that indirect-cost charges are a share of the full grant, for instance a 50% fee which means that half of the award goes to overheads.)
After the Second World Warfare, the US Workplace of Naval Analysis (ONR) started negotiating indirect-cost charges with universities on the premise of precise institutional bills. Universities needed to justify their overhead prices (administration, amenities, utilities) to obtain full reimbursement. The ONR formalized monetary auditing processes to make sure that establishments reported oblique prices precisely. This led to the observe of negotiating indirect-cost charges, which continues to be used at present.
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Since then, the reimbursement course of has been tweaked to forestall gaming the system, however has remained primarily the identical. Universities negotiate their indirect-cost charges with both the US Division of Well being and Human Providers (HHS) or the ONR. Most research-intensive universities obtain charges of fifty–60% for on-campus analysis. Non-public foundations usually have a decrease fee (10–20%), however are likely to have wider standards for what may be thought-about a direct value.